Arc Bio Awarded $1.9M SBIR Grant from NIH to Optimize its Galileo ONE Metagenomic Workflow for Cerebrospinal Fluid

Arc Bio Awarded $1.9M SBIR Grant from NIH to Optimize its Galileo ONE Metagenomic Workflow for Cerebrospinal Fluid

CAMBRIDGE, MA, Feb 20, 2022 – Arc Bio announced this week that it has received $1.9 million in funding from the National Institutes of Health (NIH) to support the development of its Research Use Only Galileo ONE metagenomic next generation sequencing workflow for the detection and quantification of microbial species in primary cerebrospinal fluid (CSF) samples.

The Phase II Small Business Innovation Research grant from the National Institute of Allergy and Infectious Diseases (NIAID) will allow the company to internally validate its sample-to-result workflow on both contrived and clinical CSF samples, as well as develop custom, integrated process controls.

“The product developed under this grant will expand the sample type compatibility of our Galileo platform, which has currently been optimized for plasma,” said CEO of Arc Bio, Dr. Todd Dickinson. “With each new sample type that we bring onboard, we move closer to achieving our goal of empowering all researchers and laboratorians to harness the power of metagenomics in their own facility.”

The first-generation Galileo ONE platform detects and quantifies over 1300 microbial species, including DNA and RNA viruses, bacteria, fungi and parasites and is slated for launch in Q2 2022.

About Arc Bio

Arc Bio aims to create a healthier world by delivering robust sample-to-report microbial profiling workflows combined with data-driven health intelligence software tools to enable a new standard of care for disease detection and monitoring. Its Galileo™ platform represents the next generation of turnkey metagenomics solutions that combine next generation sequencing laboratory workflows with automated bioinformatics pipelines to deliver accurate, comprehensive, and quantitative microbial profiling. Arc Bio is based in Scotts Valley, California and Cambridge, Massachusetts.

For more information on Arc Bio, its technology and its service offerings visit www.arcbio.com

Arc Bio working with Astrea Forensics and forensic nonprofits to evaluate novel method for extracting genomic information from degraded samples

Arc Bio working with Astrea Forensics and forensic nonprofits to evaluate novel method for extracting genomic information from degraded samples

Arc Bio, a genomic tools and solutions provider, announced that it is working with Astrea Forensics and several forensic nonprofit agencies, including the National Center for Missing and Exploited Children and the DNA Doe Project, to evaluate a novel sample preparation approach as part of a grant funded by the National Institute of Justice. This method could help reduce the amount of sequencing required to recover phenotype- and ancestry-informative markers in degraded forensic samples such as hair and bone.

Arc Bio specializes in the development of genomic tools and software for the sensitive, accurate analysis of a variety of samples, including degraded and low-input samples such as plasma. While its focus is on deploying these tools for infectious disease research applications, it continues to develop and test novel methods with a variety of applications. Arc Bio also offers custom services for partners who would like to take advantage of its unique capabilities. For more information, visit https://arcbio.com/services/.

Press Release – Arc Bio Launches Galileo™ Pathogen Solution (GPS) Product Line, a Fully Integrated NGS-based Metagenomics Platform for Revolutionizing Pathogen Detection

Press Release – Arc Bio Launches Galileo™ Pathogen Solution (GPS) Product Line, a Fully Integrated NGS-based Metagenomics Platform for Revolutionizing Pathogen Detection

Arc Bio Launches Galileo™ Pathogen Solution (GPS) Product Line, a Fully Integrated NGS-based Metagenomics Platform for Revolutionizing Pathogen Detection

GPS-Transplant, the First Product in the GPS Line, is A Single Comprehensive Test to Simultaneously Detect and Quantify Multiple Viral Infections

May 01, 2019, 08:27 ET

MENLO PARK, Calif. and CAMBRIDGE, Mass.May 1, 2019 /PRNewswire/ — Arc Bio today launched its Galileo™ Pathogen Solution (GPS) product line at the ASM Clinical Virology Symposium (CVS) in Savannah. With this announcement comes the Early Access commercial release of the first product in the GPS line: GPS-Transplant.* GPS-Transplant is a comprehensive next-generation sequencing (NGS) test providing data to aid in the monitoring of post-transplant patients who are at high risk for infection or reactivation of potentially fatal viral infections.

With the current standard of real-time quantitative PCR (qPCR) technology, only one virus can be detected per test, despite there being hundreds of different viral strains that can infect transplant patients.  GPS-Transplant is one comprehensive test able to detect the most common viral infections among transplant patients – including Cytomegalovirus (CMV), Epstein–Barr virus (EBV), BK virus (BKV) and human adenovirus (hADv) – and their variances and genotypes, as well as rarer infections.  GPS-Transplant offers the ability to detect antiviral resistance mutations, coupled with simultaneous quantitative detection of greater than 350 viral strains.

GPS-Transplant will initially be made available as a Research Use Only test that laboratories can purchase and validate in their own laboratories as a Laboratory Developed Test.

At a workshop at CVS on enabling NGS-based metagenomics in the clinical virology laboratory, Benjamin Pinsky, MD, PhD, Medical Director of Clinical Virology at Stanford Healthcare & Stanford Children’s Health, will present data from his study of GPS-Transplant in immunocompromised patients.

“My team observed near perfect agreement between samples quantified by both qPCR and the Galileo™ Pathogen Solution,” Pinsky said.  “By using Galileo™ my team was also able to identify a number of viruses that were not initially tested by the clinical teams.”

Data from two additional studies will also be presented at CVS. “The ability to transform metagenomic data into a titer and compare accurately with singleplex qPCR assays is outstanding and completely novel in this field,” said Judith Breuer, MD, Professor of Virology at University College London and Honorary Consultant Virologist at Great Ormond Street Hospital for Children NHS Trust, whose team will present  one of these studies.  “We have used metagenomics for the past two years in my laboratory, the development and introduction of which was relatively complex and time consuming.  Arc Bio’s out-of-the-box concept certainly brings advantages to laboratories who wish to evaluate this cutting-edge technology but who don’t have the expertise to do this alone.”

The number of transplants in the U.S. is growing by approximately 4% yearly1, and of the more than 57,000 transplants each year, about 30% of all recipients will get a viral infection.2 The average cost to treat a viral infection from a donor organ or reactivation post-transplant per patient is about $400,000.3

“When we mapped out our suite of NGS-based metagenomics research solutions under the Galileo™ product family, we felt it was important to first help laboratories address areas of greatest need. Transplantation was an obvious candidate, where the frequency of infection, along with associated costs and stress on patients and families, is high,” said Arc Bio Chief Executive Officer Dr. Todd Dickinson. “Towards that end, we focused on delivering an integrated solution to provide valuable information relating to the viral status in post-transplant patients. We are very pleased to now make this powerful viral monitoring solution commercially available for research use only to laboratories around the world. Going forward, the Galileo™ line of products will continue to grow as we further expand menu and functionality to include broader patient populations.”

Galileo™ Pathogen Solution provides healthcare professionals with a research tool that gives them the power to perform sophisticated pathogen analyses without requiring bioinformatics expertise. It is a sample-to-report solution built around the Illumina NGS platform that consists of reagents, built-in assay controls, and Galileo™ Analytics, a cloud-based proprietary software that provides quick and reliable results, an intuitive user interface, and detailed, actionable reports. Galileo™ Analytics leverages Arc Bio’s highly curated pathogen database (ArcIve) and also incorporates the best-in-class Galileo™ AMR resistance prediction technology launched in 2018.

About Arc Bio 
Arc Bio is revolutionizing the field of antimicrobial resistance and infectious disease by developing integrated next-generation sequencing lab workflow and software solutions tools that allow for fast, precise and cost-effective analysis.  The Arc Bio Galileo™ Pathogen Solution enables accurate strain level identification and antimicrobial resistance annotation of virtually all pathogenic microbes present in a primary sample in less than 48 hours.  Arc Bio is based in Menlo Park, California and Cambridge, Massachusetts. For more information on Arc Bio, its technology and its service offerings visit www.arcbio.com

*All products are currently for Research Use Only

References:
1Data from the Health Resources & Service Administration, an agency of the U.S. Department of Health and Human Services, based on U.S. transplants in 2012 through 2017
2Azevedo* LS, Pierrotti LC, Abdala E, et al. Cytomegalovirus infection in transplant recipients. Clinics. 2015;70(7):515-523
3Fu L. Luan, Linda J. StuckeyJeong M. ParkDaniel KaulDiane Cibrik, and Akinlolu Ojo Six-Month Prophylaxis Is Cost Effective in Transplant Patients at High Risk for Cytomegalovirus Infection J. Am. Soc. Nephrol. 2009 20: 2449-2458

 

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Press Release – Arc Bio Established to Develop NGS Tools to Revolutionize Infectious Disease Field

Press Release – Arc Bio Established to Develop NGS Tools to Revolutionize Infectious Disease Field

Arc Bio Established to Develop NGS Tools to Revolutionize Infectious Disease Field

MENLO PARK, Calif. and CAMBRIDGE, Mass.

July 24, 2018 

/PRNewswire/ — Arc Bio, founded by leading geneticists and bioinformaticians, announced today the launch of its proprietary antimicrobial resistance software, marking the first in what will be a series of new next-generation sequencing (NGS)-based products aimed at revolutionizing the field of pathogen detection. Galileo™ AMR is an antimicrobial resistance (AMR) detection software that provides fast, accurate annotations for any gram-negative bacterial DNA sequence in less than five minutes.

“At Arc Bio, we are on a mission to improve the human condition by delivering new tools that profoundly change how disease is diagnosed, treated and managed. The launch of Galileo™ AMR is our first step towards achieving this goal,” said Arc Bio Chief Executive Officer Dr. Todd Dickinson, a founding scientist of Illumina. “As the CDC reports, every year over 2 million people are infected by antibiotic resistant bacteria, causing more than 23,000 deaths in the U.S.1 Rapid identification of various strains of antimicrobial resistance, and better understanding their transmission and evolution, is vital to protecting public health.”

Arc Bio, an EdenRoc Sciences Company, was co-founded by Dr. Carlos Bustamante, a population geneticist, Professor of Biomedical Data Science, Genetics, and (by courtesy) Biology at Stanford University, where he serves as the Inaugural Chair of the Department of Biomedical Data Science; and Dr. David Andrew Sinclair, a Professor of Genetics at Harvard University and founding Director of the Paul F. Glenn Laboratories for the Biological Mechanisms of Aging. Both serve on Arc Bio’s Scientific Advisory Board.

“Our goal at Arc Bio is to revolutionize pathogen detection by developing a unique NGS lab workflow and software solution that allows for smarter and simple to use analysis,” Bustamante said. “Our current emphasis is on assisting those in public health and life science research who study antimicrobial resistance transmission and evolution of gram-negative bacteria.”

“We know that there are more efficient ways to detect and annotate resistance in order to better protect and improve public health,” Sinclair said. “As Arc Bio evolves, we aim to play an increasingly significant role in combatting the global challenges of infectious disease and antibiotic resistance.” 

Formerly known as MARA and acquired from Spokade – a leading company in the field of monitoring and controlling antimicrobial resistance — Galileo™ AMR features the most extensive archive of expert-validated gram-negative AMR genes, cassettes and other mobile elements.2,3 The software incorporates advanced analytics in a user-friendly interface to 1) quickly and efficiently detect AMR in gram-negative bacteria, 2) precisely annotate AMR genes and mobile elements in DNA sequences of any length, and 3) provide accurate annotation of plasmid AMR insert sequences.

The Galileo™ AMR cloud-based proprietary software provides precise AMR annotations, quick and reliable results, an intuitive user interface that does not require bioinformatics expertise, and detailed, easy-to-understand diagrams.

About Arc Bio 

Arc Bio is revolutionizing the field of antimicrobial resistance and infectious disease by developing next generation sequencing tools that allow for fast, accurate and cost-effective analysis. Its Galileo™ AMR – an antimicrobial resistance (AMR) detection software — can provide fast, accurate annotations for any gram-negative bacterial DNA sequence in less than five minutes.

Arc Bio is based in Menlo Park, California and Cambridge, Massachusetts. For more information on Arc Bio, its technology and its service offerings visit www.arcbio.com.

Related Links: PRNewswire

References:

  1. Centers for Disease Control and Prevention  https://www.cdc.gov/drugresistance/index.html.
  2. Tsafnat G, Copty J, Partridge SR. RAC: Repository of Antibiotic resistance Cassettes. Database. 2011; bar054. doi:10.1093/database/bar054/470201
  3. Partridge SR, Tsafnat G. Automated annotation of mobile antibiotic resistance in Gram-negative bacteria: the Multiple Antibiotic Resistance Annotator (MARA) and database. 2018 Apr 1;73(4):883-890. doi: 10.1093/jac/dkx51

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